Publications:
Names of PI, undergraduates, rotating graduate students, full-time graduate students, and postdocs are in bold.
2023
Moeller, Andrew H., Jon G. Sanders, Daniel D. Sprockett, and Abigail Landers. Assessing co-diversification in host-associated microbiomes. (2023): Under review.
Trevelline, Brian K., Daniel D. Sprockett, William V. Deluca, Catherine R. Andreadis, Andrew H. Moeller*, Christopher Tonra*. Convergent remodeling of the gut microbiome is associated with host energetic condition over long-distance migration. (2023): In revision.
Brunetti, Andrés E., Mariana Lyra; Juliane Monteiro, Juan Zurano, Deigo Baldo, Célio Haddad, and Andrew H. Moeller. Convergence of gut microbiota in myrmecophagous amphibians. (2023): In revision.
Sprockett, Daniel D., Jeffrey D. Price, Anthony F. Juritsch, Robert J. Schmaltz, Madalena V. F. Real, Samantha L. Goldman, Michael J. Sheehan, Amanda E. Ramer-Tait, and Andrew H. Moeller. Home-site advantage for host-species specific gut microbiota. (2023): In revision.
Sanders, Jon G., Daniel D. Sprockett, Yingying Li, Deus Mjungu, Elizabeth V. Lonsdorf, Jean-Bosco Ndjango, Alexander V. Georgiev, John H. Hart, Crickette Sanz, David Morgan, Martine Peeters, Beatrice H. Hahn, Andrew H. Moeller. Widespread extinctions of co-diversified gut bacterial symbionts from humans. (2023): In revision.
Vogt, Caleb C., Matthew Zipple, Daniel D. Sprockett, Caitlin H. Miller, Summer Hardy, Matthew Arthur, Adam Greenstein, Melanie Colvin, Andrew H. Moeller, and Michael J. Sheehan. Spatial and social structure of rewilded laboratory mice. (2023): In revision.
2022
Sanders, Jon G., Weiwei Yan, Deus Mjungu, Elizabeth V. Lonsdorf, John A. Hart, Crickette M. Sanz, David B. Morgan, Martine Peeters, Beatrice H. Hahn, Andrew H. Moeller. A low-cost genomics workflow enables isolate screening and strain-level analyses within microbiomes. Genome Biology (2022): doi.org/10.1186/s13059-022-02777-w.
Moeller, Andrew H. Loyal gut microbes. Science (2022): doi.org/10.1126/science.ade2879.
Dillard, Brian A., Albert K. Chung, Shane C. Campbell-Staton, Alex R. Gunderson, Andrew H. Moeller. Humanization of wildlife gut microbiota in urban environments. eLife (2022): doi.org/10.7554/eLife.76381
Moeller, Andrew H. Metagenomic targets of balancing selection in the human gut. Molecular Ecology (2022): doi.org/10.1111/mec.16474
Trevelline, Brian K., Andrew H. Moeller. Robustness of mammalian gut microbiota to humanization in captivity. Frontiers in Ecology and Evolution (2022): doi.org/10.3389/fevo.2021.785089
Goldman, Samantha L., Jon G. Sanders, Weiwei Yan, Anthony Denice, Margaret Cornwall, Kathleen N. Ivey, Emily N. Taylor, Alex Gunderson, Michael J. Sheehan, Deus Mjungu, Elizabeth V. Lonsdorf, Anne E. Pusey, Beatrice H. Hahn, Andrew H. Moeller. Culture-enriched molecular profiling improves resolution of the vertebrate gut microbiota. Molecular Ecology Resources (2021): doi.org/10.1111/1755-0998.13456
2021
Sarkar, Amar, Siobhán Harty, Andrew H.Moeller, Sabra L.Klein, Susan E.Erdman, Karl J.Friston, Rachel N.Carmody. The gut microbiome as a biomarker of differential susceptibility to SARS-CoV-2. Trends in Molecular Medicine (2021): doi.org/10.1016/j.molmed.2021.09.009
Moeller, Andrew H. Genomic expansions in the human gut microbiome. Genome Biology and Evolution (2021): doi.org/10.1093/gbe/evab156
Hernandez, Christopher J., Andrew H. Moeller. The Microbiome: A Heritable Contributor to Bone Morphology? Seminars in Cell and Developmental Biology (2021): doi.org/10.1016/j.semcdb.2021.06.022
Houtz, Jennifer L., Jon G. Sanders, Anthony Denice, Andrew H. Moeller. Predictable and host‐species specific humanization of the gut microbiota in captive primates. Molecular Ecology (2021): doi.org/10.1111/mec.15994
Sprockett, Daniel D., Andrew H. Moeller. Microbiomes: Infant chimps crawling with bacteria. Current Biology. 3 (2021): doi.org/10.1016/j.cub.2020.11.045
2020
Moeller, Andrew H., Jon G. Sanders. Roles of the gut microbiota in the adaptive evolution of mammalian species. Philosophical Transactions of the Royal Society B 375 (2020): 20190597.
Moeller, Andrew H., Kathleen Ivey, Margaret B. Cornwall, Kathryn Herr, Jordan Rede, Emily N. Taylor, Alex R. Gunderson. The lizard gut microbiota changes with temperature and is associated with heat tolerance. Applied and Environmental Microbiology 86 (2020): e01181-20.
Sarkar, Amar, Siobhán Harty, Katerina V-A. Johnson, Andrew H. Moeller, Elizabeth A. Archie, Laura D. Schell, Rachel N. Carmody, Timothy H. Clutton-Brock, Robin IM Dunbar, Philip WJ Burnet. Microbial transmission in animal social networks and the social microbiome. Nature Ecology & Evolution 4 (2020): 1020–1035.
Sarkar, Amar, Siobhán Harty, Katerina V‐A. Johnson, Andrew H. Moeller, Rachel N. Carmody, Soili M. Lehto, Susan E. Erdman, Robin IM Dunbar, Philip WJ Burnet. The role of the microbiome in the neurobiology of social behaviour. Biological Reviews 95 (2020): 1131–1166.
Sepulveda, Juan, and Andrew H. Moeller. The effects of temperature on animal gut microbiomes. Frontiers in Microbiology 11 (2020): 384.
2019
Moeller, Andrew H., João C. Gomes-Neto, Sara Mantz, Hatem Kittana, Rafael R. Segura Munoz, Robert J. Schmaltz, Amanda E. Ramer-Tait, Michael W. Nachman. Experimental evidence for adaptation to species-specific gut microbiota in house mice. mSphere 4 (2019): e00387-19.
2018
Moeller, Andrew H., Taichi A. Suzuki, Megan Phifer-Rixey, Michael W. Nachman. Transmission modes of the mammalian gut microbiota. Science 362 (2018): 453–457.
Sarkar, Amar, Siobhán Harty, Soili M. Lehto, Andrew H. Moeller, Timothy G. Dinan, Robin IM Dunbar, John F. Cryan, Philip WJ Burnet. The microbiome in psychology and cognitive neuroscience. Trends in Cognitive Sciences 22 (2018): 611–636.
Barbian, Hannah J., Yingying Li, Miguel Ramirez, Zachary Klase, Iddi Lipende, Deus Mjungu, Andrew H. Moeller, Micahel L. Wilson, Anne E. Pusey, Elizabeth V. Lonsdorf, Frederic D. Bushman, Beatrice H. Hahn. Destabilization of the gut microbiome marks the end-stage of Simian Immunodeficiency virus infection in wild chimpanzees. American Journal of Primatology 80 (2018): e22515.
2017
Moeller, Andrew H., Taichi A. Suzuki, Dana Lin, Eileen A. Lacey, Samuel K. Wasser, Michael W. Nachman. Dispersal limitation promotes the diversification of the mammalian gut microbiota. Proceedings of the National Academy of Sciences USA 52 (2017): 13768–13773.
Moeller, Andrew H. The shrinking human gut microbiome. Current Opinion in Microbiology 38 (2017): 30–35.
Raymann, Kasie, Andrew H. Moeller, Andrew L. Goodman, Howard Ochman. Unexplored Archaeal Diversity in the Great Ape Gut Microbiome. mSphere 2 (2017): e00026-17.
2016
Moeller, Andrew H., Alejandro Caro-Quintero, Deus Mjungu, Alexander V. Georgiev, Elizabeth V. Lonsdorf, Martin N. Muller, Anne E. Pusey, Martine Peeters, Beatrice H. Hahn, Howard Ochman. Cospeciation of gut microbiota with hominids. Science 353 (2016): 380–382.
Moeller, Andrew H., Steffen Foerster, Michael L. Wilson, Anne E. Pusey, Beatrice H. Hahn, Howard Ochman. Social behavior shapes the chimpanzee pan-microbiome. Science Advances 2 (2016): e1500997.
2015
Waldor, Matthew K., Gene Tyson, Elhanan Borenstein, Howard Ochman, Andrew H. Moeller, B. Brett Finlay, Heidi H. Kong, Jeffrey I. Gordon, Karen E. Nelson, Karim Dabbagh, Hamilton Smith. Where next for microbiome research? PLoS biology 13 (2015): e1002050–e1002050.
Moeller, Andrew H., Martine Peeters, Ahidjo Ayouba, Eitel Mpoudi Ngole, Amadine Esteban, Beatrice H. Hahn, and Howard Ochman. "Stability of the gorilla microbiome despite simian immunodeficiency virus infection." Molecular Ecology 24 (2015): 690–697.
2014
Moeller, Andrew H., Yingying Li, Eitel Mpoudi Ngole, Steve Ahuka-Mundeke, Elizabeth V. Lonsdorf, Anne E. Pusey, Martine Peeters, Beatrice H. Hahn, and Howard Ochman. "Rapid changes in the gut microbiome during human evolution." Proceedings of the National Academy of Sciences USA 111 (2014): 16431–16435.
Moeller, Andrew H., Howard Ochman. Microbiomes are true to type. Proceedings of the National Academy of Sciences USA 111 (2014): 9372–9373.
2013
Moeller, Andrew H., Martine Peeters, Jean-Basco Ndjango, Yingying Li, Beatrice H. Hahn, Howard Ochman. Sympatric chimpanzees and gorillas harbor convergent gut microbial communities. Genome Research 23 (2013): 1715–1720.
Moeller, Andrew H.*, Meghan Shilts*, Yingying Li, Rebecca S. Rudicell, Elizabeth V. Lonsdorf, Anne E. Pusey, Michael L. Wilson, Beatrice H. Hahn, Howard Ochman. SIV-induced instability of the chimpanzee gut microbiome. Cell Host & Microbe 14 (2013): 340–345.
Moeller, Andrew H., Howard Ochman. Factors that drive variation among gut microbial communities. Gut Microbes 4 (2013): 403–408.
López-Giráldez, Francesc, Andrew H. Moeller, Jeffrey P. Townsend. Evaluating Phylogenetic Informativeness as a Predictor of Phylogenetic Signal for Metazoan, Fungal, and Mammalian Phylogenomic Data Sets. BioMed Research International 2013 (2013): 621604.
Moeller, Andrew H., Jeffrey P. Townsend. Response to: The relative utility of sequence divergence and phylogenetic informativeness profiling in phylogenetic study design. Molecular Phylogenetics and Evolution 66 (2013): 436.
2012
Moeller, Andrew H., Patrick H. Degnan, Anne E. Pusey, Michael L. Wilson, Beatrice H. Hahn, Howard Ochman. Chimpanzees and humans harbour compositionally similar gut enterotypes. Nature Communications 3 (2012): 1179.
2011
Moeller, Andrew H., Jeffrey P. Townsend. Phylogenetic informativeness profiling of 12 genes for 28 vertebrate taxa without divergence dates. Molecular Phylogenetics and Evolution 60 (2011): 271621604–272.
2023
Moeller, Andrew H., Jon G. Sanders, Daniel D. Sprockett, and Abigail Landers. Assessing co-diversification in host-associated microbiomes. (2023): Under review.
Trevelline, Brian K., Daniel D. Sprockett, William V. Deluca, Catherine R. Andreadis, Andrew H. Moeller*, Christopher Tonra*. Convergent remodeling of the gut microbiome is associated with host energetic condition over long-distance migration. (2023): In revision.
Brunetti, Andrés E., Mariana Lyra; Juliane Monteiro, Juan Zurano, Deigo Baldo, Célio Haddad, and Andrew H. Moeller. Convergence of gut microbiota in myrmecophagous amphibians. (2023): In revision.
Sprockett, Daniel D., Jeffrey D. Price, Anthony F. Juritsch, Robert J. Schmaltz, Madalena V. F. Real, Samantha L. Goldman, Michael J. Sheehan, Amanda E. Ramer-Tait, and Andrew H. Moeller. Home-site advantage for host-species specific gut microbiota. (2023): In revision.
Sanders, Jon G., Daniel D. Sprockett, Yingying Li, Deus Mjungu, Elizabeth V. Lonsdorf, Jean-Bosco Ndjango, Alexander V. Georgiev, John H. Hart, Crickette Sanz, David Morgan, Martine Peeters, Beatrice H. Hahn, Andrew H. Moeller. Widespread extinctions of co-diversified gut bacterial symbionts from humans. (2023): In revision.
Vogt, Caleb C., Matthew Zipple, Daniel D. Sprockett, Caitlin H. Miller, Summer Hardy, Matthew Arthur, Adam Greenstein, Melanie Colvin, Andrew H. Moeller, and Michael J. Sheehan. Spatial and social structure of rewilded laboratory mice. (2023): In revision.
2022
Sanders, Jon G., Weiwei Yan, Deus Mjungu, Elizabeth V. Lonsdorf, John A. Hart, Crickette M. Sanz, David B. Morgan, Martine Peeters, Beatrice H. Hahn, Andrew H. Moeller. A low-cost genomics workflow enables isolate screening and strain-level analyses within microbiomes. Genome Biology (2022): doi.org/10.1186/s13059-022-02777-w.
Moeller, Andrew H. Loyal gut microbes. Science (2022): doi.org/10.1126/science.ade2879.
Dillard, Brian A., Albert K. Chung, Shane C. Campbell-Staton, Alex R. Gunderson, Andrew H. Moeller. Humanization of wildlife gut microbiota in urban environments. eLife (2022): doi.org/10.7554/eLife.76381
Moeller, Andrew H. Metagenomic targets of balancing selection in the human gut. Molecular Ecology (2022): doi.org/10.1111/mec.16474
Trevelline, Brian K., Andrew H. Moeller. Robustness of mammalian gut microbiota to humanization in captivity. Frontiers in Ecology and Evolution (2022): doi.org/10.3389/fevo.2021.785089
Goldman, Samantha L., Jon G. Sanders, Weiwei Yan, Anthony Denice, Margaret Cornwall, Kathleen N. Ivey, Emily N. Taylor, Alex Gunderson, Michael J. Sheehan, Deus Mjungu, Elizabeth V. Lonsdorf, Anne E. Pusey, Beatrice H. Hahn, Andrew H. Moeller. Culture-enriched molecular profiling improves resolution of the vertebrate gut microbiota. Molecular Ecology Resources (2021): doi.org/10.1111/1755-0998.13456
2021
Sarkar, Amar, Siobhán Harty, Andrew H.Moeller, Sabra L.Klein, Susan E.Erdman, Karl J.Friston, Rachel N.Carmody. The gut microbiome as a biomarker of differential susceptibility to SARS-CoV-2. Trends in Molecular Medicine (2021): doi.org/10.1016/j.molmed.2021.09.009
Moeller, Andrew H. Genomic expansions in the human gut microbiome. Genome Biology and Evolution (2021): doi.org/10.1093/gbe/evab156
Hernandez, Christopher J., Andrew H. Moeller. The Microbiome: A Heritable Contributor to Bone Morphology? Seminars in Cell and Developmental Biology (2021): doi.org/10.1016/j.semcdb.2021.06.022
Houtz, Jennifer L., Jon G. Sanders, Anthony Denice, Andrew H. Moeller. Predictable and host‐species specific humanization of the gut microbiota in captive primates. Molecular Ecology (2021): doi.org/10.1111/mec.15994
Sprockett, Daniel D., Andrew H. Moeller. Microbiomes: Infant chimps crawling with bacteria. Current Biology. 3 (2021): doi.org/10.1016/j.cub.2020.11.045
2020
Moeller, Andrew H., Jon G. Sanders. Roles of the gut microbiota in the adaptive evolution of mammalian species. Philosophical Transactions of the Royal Society B 375 (2020): 20190597.
Moeller, Andrew H., Kathleen Ivey, Margaret B. Cornwall, Kathryn Herr, Jordan Rede, Emily N. Taylor, Alex R. Gunderson. The lizard gut microbiota changes with temperature and is associated with heat tolerance. Applied and Environmental Microbiology 86 (2020): e01181-20.
Sarkar, Amar, Siobhán Harty, Katerina V-A. Johnson, Andrew H. Moeller, Elizabeth A. Archie, Laura D. Schell, Rachel N. Carmody, Timothy H. Clutton-Brock, Robin IM Dunbar, Philip WJ Burnet. Microbial transmission in animal social networks and the social microbiome. Nature Ecology & Evolution 4 (2020): 1020–1035.
Sarkar, Amar, Siobhán Harty, Katerina V‐A. Johnson, Andrew H. Moeller, Rachel N. Carmody, Soili M. Lehto, Susan E. Erdman, Robin IM Dunbar, Philip WJ Burnet. The role of the microbiome in the neurobiology of social behaviour. Biological Reviews 95 (2020): 1131–1166.
Sepulveda, Juan, and Andrew H. Moeller. The effects of temperature on animal gut microbiomes. Frontiers in Microbiology 11 (2020): 384.
2019
Moeller, Andrew H., João C. Gomes-Neto, Sara Mantz, Hatem Kittana, Rafael R. Segura Munoz, Robert J. Schmaltz, Amanda E. Ramer-Tait, Michael W. Nachman. Experimental evidence for adaptation to species-specific gut microbiota in house mice. mSphere 4 (2019): e00387-19.
2018
Moeller, Andrew H., Taichi A. Suzuki, Megan Phifer-Rixey, Michael W. Nachman. Transmission modes of the mammalian gut microbiota. Science 362 (2018): 453–457.
Sarkar, Amar, Siobhán Harty, Soili M. Lehto, Andrew H. Moeller, Timothy G. Dinan, Robin IM Dunbar, John F. Cryan, Philip WJ Burnet. The microbiome in psychology and cognitive neuroscience. Trends in Cognitive Sciences 22 (2018): 611–636.
Barbian, Hannah J., Yingying Li, Miguel Ramirez, Zachary Klase, Iddi Lipende, Deus Mjungu, Andrew H. Moeller, Micahel L. Wilson, Anne E. Pusey, Elizabeth V. Lonsdorf, Frederic D. Bushman, Beatrice H. Hahn. Destabilization of the gut microbiome marks the end-stage of Simian Immunodeficiency virus infection in wild chimpanzees. American Journal of Primatology 80 (2018): e22515.
2017
Moeller, Andrew H., Taichi A. Suzuki, Dana Lin, Eileen A. Lacey, Samuel K. Wasser, Michael W. Nachman. Dispersal limitation promotes the diversification of the mammalian gut microbiota. Proceedings of the National Academy of Sciences USA 52 (2017): 13768–13773.
Moeller, Andrew H. The shrinking human gut microbiome. Current Opinion in Microbiology 38 (2017): 30–35.
Raymann, Kasie, Andrew H. Moeller, Andrew L. Goodman, Howard Ochman. Unexplored Archaeal Diversity in the Great Ape Gut Microbiome. mSphere 2 (2017): e00026-17.
2016
Moeller, Andrew H., Alejandro Caro-Quintero, Deus Mjungu, Alexander V. Georgiev, Elizabeth V. Lonsdorf, Martin N. Muller, Anne E. Pusey, Martine Peeters, Beatrice H. Hahn, Howard Ochman. Cospeciation of gut microbiota with hominids. Science 353 (2016): 380–382.
Moeller, Andrew H., Steffen Foerster, Michael L. Wilson, Anne E. Pusey, Beatrice H. Hahn, Howard Ochman. Social behavior shapes the chimpanzee pan-microbiome. Science Advances 2 (2016): e1500997.
2015
Waldor, Matthew K., Gene Tyson, Elhanan Borenstein, Howard Ochman, Andrew H. Moeller, B. Brett Finlay, Heidi H. Kong, Jeffrey I. Gordon, Karen E. Nelson, Karim Dabbagh, Hamilton Smith. Where next for microbiome research? PLoS biology 13 (2015): e1002050–e1002050.
Moeller, Andrew H., Martine Peeters, Ahidjo Ayouba, Eitel Mpoudi Ngole, Amadine Esteban, Beatrice H. Hahn, and Howard Ochman. "Stability of the gorilla microbiome despite simian immunodeficiency virus infection." Molecular Ecology 24 (2015): 690–697.
2014
Moeller, Andrew H., Yingying Li, Eitel Mpoudi Ngole, Steve Ahuka-Mundeke, Elizabeth V. Lonsdorf, Anne E. Pusey, Martine Peeters, Beatrice H. Hahn, and Howard Ochman. "Rapid changes in the gut microbiome during human evolution." Proceedings of the National Academy of Sciences USA 111 (2014): 16431–16435.
Moeller, Andrew H., Howard Ochman. Microbiomes are true to type. Proceedings of the National Academy of Sciences USA 111 (2014): 9372–9373.
2013
Moeller, Andrew H., Martine Peeters, Jean-Basco Ndjango, Yingying Li, Beatrice H. Hahn, Howard Ochman. Sympatric chimpanzees and gorillas harbor convergent gut microbial communities. Genome Research 23 (2013): 1715–1720.
Moeller, Andrew H.*, Meghan Shilts*, Yingying Li, Rebecca S. Rudicell, Elizabeth V. Lonsdorf, Anne E. Pusey, Michael L. Wilson, Beatrice H. Hahn, Howard Ochman. SIV-induced instability of the chimpanzee gut microbiome. Cell Host & Microbe 14 (2013): 340–345.
Moeller, Andrew H., Howard Ochman. Factors that drive variation among gut microbial communities. Gut Microbes 4 (2013): 403–408.
López-Giráldez, Francesc, Andrew H. Moeller, Jeffrey P. Townsend. Evaluating Phylogenetic Informativeness as a Predictor of Phylogenetic Signal for Metazoan, Fungal, and Mammalian Phylogenomic Data Sets. BioMed Research International 2013 (2013): 621604.
Moeller, Andrew H., Jeffrey P. Townsend. Response to: The relative utility of sequence divergence and phylogenetic informativeness profiling in phylogenetic study design. Molecular Phylogenetics and Evolution 66 (2013): 436.
2012
Moeller, Andrew H., Patrick H. Degnan, Anne E. Pusey, Michael L. Wilson, Beatrice H. Hahn, Howard Ochman. Chimpanzees and humans harbour compositionally similar gut enterotypes. Nature Communications 3 (2012): 1179.
2011
Moeller, Andrew H., Jeffrey P. Townsend. Phylogenetic informativeness profiling of 12 genes for 28 vertebrate taxa without divergence dates. Molecular Phylogenetics and Evolution 60 (2011): 271621604–272.